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Publications
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Guidelines for Genome-Scale Analysis of Biological Rhythms
Hughes ME, Abruzzi KC, Allada R, Anafi R, Arpat AB, Asher G, Baldi P, de Bekker C, Bell-Pedersen D, Blau J, Brown S, Ceriani MF, Chen Z, Chiu JC, Cox J, Crowell AM, DeBruyne JP, Dijk DJ, DiTacchio L, Doyle FJ, Duffield GE, Dunlap JC, Eckel-Mahan K, Esser KA, FitzGerald GA, Forger DB, Francey LJ, Fu YH, Gachon F, Gatfield D, de Goede P, Golden SS, Green C, Harer J, Harmer S, Haspel J, Hastings MH, Herzel H, Herzog ED, Hoffmann C, Hong C, Hughey JJ, Hurley JM, de la Iglesia HO, Johnson C, Kay SA, Koike N, Kornacker K, Kramer A, Lamia K, Leise T, Lewis SA, Li J, Li X, Liu AC, Loros JJ, Martino TA, Menet JS, Merrow M, Millar AJ, Mockler T, Naef F, Nagoshi E, Nitabach MN, Olmedo M, Nusinow DA, Ptáček LJ, Rand D, Reddy AB, Robles MS, Roenneberg T, Rosbash M, Ruben MD, Rund SSC, Sancar A, Sassone-Corsi P, Sehgal A, Sherrill-Mix S, Skene DJ, Storch KF, Takahashi JS, Ueda HR, Wang H, Weitz C, Westermark PO, Wijnen H, Xu Y, Wu G, Yoo SH, Young M, Zhang EE, Zielinski T, Hogenesch JB
2017 Oct;32(5):380-393
J Biol Rhythms
2017-11-03
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Hughes ME, Abruzzi KC, Allada R, Anafi R, Arpat AB, Asher G, Baldi P, de Bekker C, Bell-Pedersen D, Blau J, Brown S, Ceriani MF, Chen Z, Chiu JC, Cox J, Crowell AM, DeBruyne JP, Dijk DJ, DiTacchio L, Doyle FJ, Duffield GE, Dunlap JC, Eckel-Mahan K, Esser KA, FitzGerald GA, Forger DB, Francey LJ, Fu YH, Gachon F, Gatfield D, de Goede P, Golden SS, Green C, Harer J, Harmer S, Haspel J, Hastings MH, Herzel H, Herzog ED, Hoffmann C, Hong C, Hughey JJ, Hurley JM, de la Iglesia HO, Johnson C, Kay SA, Koike N, Kornacker K, Kramer A, Lamia K, Leise T, Lewis SA, Li J, Li X, Liu AC, Loros JJ, Martino TA, Menet JS, Merrow M, Millar AJ, Mockler T, Naef F, Nagoshi E, Nitabach MN, Olmedo M, Nusinow DA, Ptáček LJ, Rand D, Reddy AB, Robles MS, Roenneberg T, Rosbash M, Ruben MD, Rund SSC, Sancar A, Sassone-Corsi P, Sehgal A, Sherrill-Mix S, Skene DJ, Storch KF, Takahashi JS, Ueda HR, Wang H, Weitz C, Westermark PO, Wijnen H, Xu Y, Wu G, Yoo SH, Young M, Zhang EE, Zielinski T, Hogenesch JB
2017 Oct;32(5):380-393
Guidelines for Genome-Scale Analysis of Biological Rhythms
The genomic landscape of human cellular circadian variation points to a novel role for the signalosome
Gaspar L, Howald C, Popadin K, Maier B, Mauvoisin D, Moriggi E, Gutierrez-Arcelus M, Falconnet E, Borel C, Kunz D, Kramer A, Gachon F, Dermitzakis ET, Antonarakis SE, Brown SA
2017 Sep 4;6:e24994
Elife
2017-09-04
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Gaspar L, Howald C, Popadin K, Maier B, Mauvoisin D, Moriggi E, Gutierrez-Arcelus M, Falconnet E, Borel C, Kunz D, Kramer A, Gachon F, Dermitzakis ET, Antonarakis SE, Brown SA
2017 Sep 4;6:e24994
The genomic landscape of human cellular circadian variation points to a novel role for the signalosome
Principles for circadian orchestration of metabolic pathways
Thurley K, Herbst C, Wesener F, Koller B, Wallach T, Maier B, Kramer A, Westermark PO
2017 Feb 14;114(7):1572-1577
Proc Natl Acad Sci USA
2017-02-14
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Thurley K, Herbst C, Wesener F, Koller B, Wallach T, Maier B, Kramer A, Westermark PO
2017 Feb 14;114(7):1572-1577
Principles for circadian orchestration of metabolic pathways
2016
2016-12-31
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2016
Feedback Loops of the Mammalian Circadian Clock Constitute Repressilator
Pett JP, Korenčič A, Wesener F, Kramer A, Herzel H
2016 Dec 12;12(12):e1005266
PLoS Comput Biol
2016-12-12
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Pett JP, Korenčič A, Wesener F, Kramer A, Herzel H
2016 Dec 12;12(12):e1005266
Feedback Loops of the Mammalian Circadian Clock Constitute Repressilator
Reciprocal regulation of carbon monoxide metabolism and the circadian clock
Klemz R, Reischl S, Wallach T, Witte N, Jürchott K, Klemz S, Lang V, Lorenzen S, Knauer M, Heidenreich S, Xu M, Ripperger JA, Schupp M, Stanewsky R, Kramer A
2017 Jan;24(1):15-22
Nat Struct Mol Biol
2016-11-28
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Klemz R, Reischl S, Wallach T, Witte N, Jürchott K, Klemz S, Lang V, Lorenzen S, Knauer M, Heidenreich S, Xu M, Ripperger JA, Schupp M, Stanewsky R, Kramer A
2017 Jan;24(1):15-22
Reciprocal regulation of carbon monoxide metabolism and the circadian clock
Regulation of the clock gene expression in human adipose tissue by weight loss
Pivovarova O, Gögebakan Ö, Sucher S, Groth J, Murahovschi V, Kessler K, Osterhoff M, Rudovich N, Kramer A, Pfeiffer AF
2016 Jun;40(6):899-906
Int J Obes
2016-02-23
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Pivovarova O, Gögebakan Ö, Sucher S, Groth J, Murahovschi V, Kessler K, Osterhoff M, Rudovich N, Kramer A, Pfeiffer AF
2016 Jun;40(6):899-906
Regulation of the clock gene expression in human adipose tissue by weight loss
2015
2015-12-31
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2015
Genome-Wide Screen Reveals Rhythmic Regulation of Genes Involved in Odor Processing in the Olfactory Epithelium
Saleh M, Jürchott K, Oberland S, Neuhaus EM, Kramer A, Abraham U
2015 Dec;30(6):506-18
J Biol Rhythms
2015-10-19
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Saleh M, Jürchott K, Oberland S, Neuhaus EM, Kramer A, Abraham U
2015 Dec;30(6):506-18
Genome-Wide Screen Reveals Rhythmic Regulation of Genes Involved in Odor Processing in the Olfactory Epithelium
Highly Efficient Genome Editing via CRISPR/Cas9 to Create Clock Gene Knockout Cells
Korge S, Grudziecki A, Kramer A
2015 Oct;30(5):389-95
J Biol Rhythms
2015-08-04
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Korge S, Grudziecki A, Kramer A
2015 Oct;30(5):389-95
Highly Efficient Genome Editing via CRISPR/Cas9 to Create Clock Gene Knockout Cells
Tuning the phase of circadian entrainment
Bordyugov G, Abraham U, Granada A, Rose P, Imkeller K, Kramer A, Herzel H
2015 Jul 6;12(108):20150282
J R Soc Interface
2015-07-06
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Bordyugov G, Abraham U, Granada A, Rose P, Imkeller K, Kramer A, Herzel H
2015 Jul 6;12(108):20150282
Tuning the phase of circadian entrainment
Fbxl11 Is a Novel Negative Element of the Mammalian Circadian Clock
Reischl S, Kramer A
2015 Aug;30(4):291-301
J Biol Rhythms
2015-06-02
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Reischl S, Kramer A
2015 Aug;30(4):291-301
Fbxl11 Is a Novel Negative Element of the Mammalian Circadian Clock
Changes of Dietary Fat and Carbohydrate Content Alter Central and Peripheral Clock in Humans
Pivovarova O, Jürchott K, Rudovich N, Hornemann S, Ye L, Möckel S, Murahovschi V, Kessler K, Seltmann AC, Maser-Gluth C, Mazuch J, Kruse M, Busjahn A, Kramer A, Pfeiffer AF
2015 Jun;100(6):2291-302
J Clin Endocrinol Metab
2015-05-30
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Pivovarova O, Jürchott K, Rudovich N, Hornemann S, Ye L, Möckel S, Murahovschi V, Kessler K, Seltmann AC, Maser-Gluth C, Mazuch J, Kruse M, Busjahn A, Kramer A, Pfeiffer AF
2015 Jun;100(6):2291-302
Changes of Dietary Fat and Carbohydrate Content Alter Central and Peripheral Clock in Humans
Chemical chronobiology: Toward drugs manipulating time
Wallach T, Kramer A
2015 Jun 22;589(14):1530-8
FEBS Lett
2015-05-07
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Wallach T, Kramer A
2015 Jun 22;589(14):1530-8
Chemical chronobiology: Toward drugs manipulating time
Circadian rhythms. When the circadian clock becomes blind
Kramer A
2015 Jan 30;347(6221):476-7
Science
2015-01-30
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Kramer A
2015 Jan 30;347(6221):476-7
Circadian rhythms. When the circadian clock becomes blind
2014
2014-12-31
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2014
Circadian rhythms of cellular immunity in rheumatoid arthritis: a hypothesis-generating study
Spies CM, Hoff P, Mazuch J, Gaber T, Maier B, Strehl C, Hahne M, Jakstadt M, Huscher D, Burmester GR, Detert J, Kramer A, Buttgereit F
2015 Jan-Feb;33(1):34-43
Clin Exp Rheumatol
2014-12-22
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Spies CM, Hoff P, Mazuch J, Gaber T, Maier B, Strehl C, Hahne M, Jakstadt M, Huscher D, Burmester GR, Detert J, Kramer A, Buttgereit F
2015 Jan-Feb;33(1):34-43
Circadian rhythms of cellular immunity in rheumatoid arthritis: a hypothesis-generating study
Phosphorylation of a central clock transcription factor is required for thermal but not photic entrainment
Lee E, Jeong EH, Jeong HJ, Yildirim E, Vanselow JT, Ng F, Liu Y, Mahesh G, Kramer A, Hardin PE, Edery I, Kim EY
2014 Aug 14;10(8):e1004545
PLoS Genet
2014-08-14
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Lee E, Jeong EH, Jeong HJ, Yildirim E, Vanselow JT, Ng F, Liu Y, Mahesh G, Kramer A, Hardin PE, Edery I, Kim EY
2014 Aug 14;10(8):e1004545
Phosphorylation of a central clock transcription factor is required for thermal but not photic entrainment
Dynamics of the circadian clock protein PERIOD2 in living cells
Öllinger R, Korge S, Korte T, Koller B, Herrmann A, Kramer A
2014 Oct 1;127(Pt 19):4322-8
J Cell Sci
2014-07-29
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Öllinger R, Korge S, Korte T, Koller B, Herrmann A, Kramer A
2014 Oct 1;127(Pt 19):4322-8
Dynamics of the circadian clock protein PERIOD2 in living cells
Ras-mediated deregulation of the circadian clock in cancer
Relógio A, Thomas P, Medina-Pérez P, Reischl S, Bervoets S, Gloc E, Riemer P, Mang-Fatehi S, Maier B, Schäfer R, Leser U, Herzel H, Kramer A, Sers C
2014 May 29;10(5):e1004338
PLoS Genet
2014-05-29
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Relógio A, Thomas P, Medina-Pérez P, Reischl S, Bervoets S, Gloc E, Riemer P, Mang-Fatehi S, Maier B, Schäfer R, Leser U, Herzel H, Kramer A, Sers C
2014 May 29;10(5):e1004338
Ras-mediated deregulation of the circadian clock in cancer
Interaction of circadian clock proteins CRY1 and PER2 is modulated by zinc binding and disulfide bond formation
Schmalen I, Reischl S, Wallach T, Klemz R, Grudziecki A, Prabu JR, Benda C, Kramer A*, Wolf E* (* corresponding authors)
2014 May 22;157(5):1203-15
Cell
2014-05-22
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Schmalen I, Reischl S, Wallach T, Klemz R, Grudziecki A, Prabu JR, Benda C, Kramer A*, Wolf E* (* corresponding authors)
2014 May 22;157(5):1203-15
Interaction of circadian clock proteins CRY1 and PER2 is modulated by zinc binding and disulfide bond formation
Circadian behavior is light-reprogrammed by plastic DNA methylation
Azzi A, Dallmann R, Casserly A, Rehrauer H, Patrignani A, Maier B, Kramer A, Brown SA
2014 Mar;17(3):377-82
Nat Neurosci
2014-02-14
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Azzi A, Dallmann R, Casserly A, Rehrauer H, Patrignani A, Maier B, Kramer A, Brown SA
2014 Mar;17(3):377-82
Circadian behavior is light-reprogrammed by plastic DNA methylation
2013
2013-12-31
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2013
Structures of Drosophila cryptochrome and mouse cryptochrome1 provide insight into circadian function
Czarna A, Berndt A, Singh HR, Grudziecki A, Ladurner AG, Timinszky G, Kramer A, Wolf E
2013 Jun 6;153(6):1394-405
Cell
2013-06-06
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Czarna A, Berndt A, Singh HR, Grudziecki A, Ladurner AG, Timinszky G, Kramer A, Wolf E
2013 Jun 6;153(6):1394-405
Structures of Drosophila cryptochrome and mouse cryptochrome1 provide insight into circadian function
Dynamic circadian protein-protein interaction networks predict temporal organization of cellular functions
Wallach T, Schellenberg K, Maier B, Kalathur RK, Porras P, Wanker EE, Futschik ME, Kramer A
2013 Mar;9(3):e1003398
PLoS Genet
2013-03-28
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Wallach T, Schellenberg K, Maier B, Kalathur RK, Porras P, Wanker EE, Futschik ME, Kramer A
2013 Mar;9(3):e1003398
Dynamic circadian protein-protein interaction networks predict temporal organization of cellular functions
Human chronotypes from a theoretical perspective
Granada AE, Bordyugov G, Kramer A, Herzel H
2013;8(3):e59464. doi: 10.1371/journal.pone.0059464
PLoS One
2013-03-27
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Granada AE, Bordyugov G, Kramer A, Herzel H
2013;8(3):e59464. doi: 10.1371/journal.pone.0059464
Human chronotypes from a theoretical perspective
Odor is a time cue for circadian behavior
Abraham U, Saleh M, Kramer A
2013 Feb;28(1):26-37
J Biol Rhythms
2013-02-04
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Abraham U, Saleh M, Kramer A
2013 Feb;28(1):26-37
Odor is a time cue for circadian behavior
A NONO-gate times the cell cycle
Maier B, Kramer A
2013 Jan 29;110(5):1565-6
Proc Natl Acad Sci USA
2013-01-29
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Maier B, Kramer A
2013 Jan 29;110(5):1565-6
A NONO-gate times the cell cycle
2012
2012-12-31
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2012
Distinct roles of DBHS family members in the circadian transcriptional feedback loop
Kowalska E, Ripperger JA, Muheim C, Maier B, Kurihara Y, Fox AH, Kramer A, Brown SA
2012 Nov;32(22):4585-94
Mol Cell Biol
2012-09-10
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Kowalska E, Ripperger JA, Muheim C, Maier B, Kurihara Y, Fox AH, Kramer A, Brown SA
2012 Nov;32(22):4585-94
